邵峰，博士，副教授。主要从事演化基因组及转座子生物学等方面的研究。主持国家自然科学基金委及重庆市多项课题。重庆市生物信息学会理事。近年来在《GigaScience》、《Zoological Research》、《Database》、《Scientific Reports》、《Science》、《Cell》、《NatureCommunications》等期刊上发表论文20余篇。担任《Animals》、《Aquaculture Research》、《Biologia》、《Database》、《Fish and Shellfish Immunology》、《Genomics Proteomics & Bioinformatics》、《Immunity, Inflammation and Disease》、《Journal of Applied Genetics》、《Mobile DNA》等期刊的审稿人。
教育经历
2015-2018，西南大学生命科学学院，博士
2013-2015，西南大学生命科学学院，硕士
2008-2012，西南大学水产系，学士
工作经历
2023至今，西南大学生命科学学院，副教授
2021-2023，西南大学生命科学学院，讲师
2018-2020，西南大学生命科学学院，博士后
研究方向
演化基因组学
多组学解析动物特殊性状
转座子生物学
主持项目
国家自然科学基金项目
重庆市自然科学基金项目
重庆市国际交流访问项目
西南大学博士启动项目
论文发表
(*equal contribution,#corresponding author)
1.Xu M.*, Liao Z.*, Brock J.*, Du K.*, Li G.*, Chen Z.*, Wang Y., Gao Z., Agarwal G., Wei K.,Shao F.,Pang S., Platts A., Velde Z., Li H., Teresi S., Bird K., Niederhuth C., Xu J., Yu G., Yang J., Dai S., Nelson A., Zhang X.#, Schartl M.#, Edger P.#, Han M.#, Zhang H#. 2023 Maternal dominance contributes to subgenome differentiation in allopolyploid fishes.Nature Communications,14, 8357.
2.Dai X., Pradhan A., Liu J., Liu R., Zhai G., Zhou L.,Shao F., Yuan Z., Wang Z.#, Yin Z#. 2023 Zebrafish gonad mutant models reveal neuroendocrine mechanisms of brain sexual dimorphism and male mating behaviors of different brain regions.Biology of Sex Differences, 14, 53.
3.Zheng S.*, Tao W.*, Tao H., Yang H., Wu L.,Shao F.,Wang Z., Jin L., Peng Z.#, Wang D.#, Zhang Y#. 2023 Characterization of the male-specific region containing the candidate sex-determining gene in Amur catfish (Silurus asotus) using third-generation- and pool-sequencing data.International Journal of Biological Macromolecules, 248, 125908.
4.Mao Y., Peng T.,Shao F.,Zhao Q., Peng Z#. 2023 Molecular evolution of the hemoglobin gene family across vertebrates.Genetica, 151, 201-213.
5.Shao F., Wu Z., Xu Y., Li P., Peng Z#. 2023 Genome of striped eel catfish (Plotosus lineatus) provides insights into the adaptive evolution of amphidromous fish.Zoological Research, 44, 349-352.
6.Shao Y.*, Zhou L.*, Li F., Zhao L., Zhang B.,Shao F., Chen J., Chen C., Bi X., Zhuang X., Zhu H., Hu J., Sun Z., Li X., Wang D., Rivas-González I., Wang S., Wang Y., Chen W., Li G, Lu H., Liu Y., Kuderna L., Farh K., Fan P., Yu L., Li M., Liu Z., Tiley G., Yoder A., Roos C., Hayakawa T., Marques-Bonet T., Rogers J., Stenson P., Cooper D., Schierup M., Yao Y., Zhang Y., Wang W., Qi X.#, Zhang G.#, Wu D#. 2023 Phylogenomic analyses provide insights into primate evolution.Science,380, 913-924.
7.Zhao Q.,Shao F., Li Y., Yi SV., Peng Z#. 2022 Novel genome sequence of Chinese cavefish (Triplophysa rosa) reveals pervasive relaxation of natural selection in cavefish genomes.Molecular Ecology, 31, 5831-5845.
8.Xu Y.*,Shao F.*, Chen W., Ni L., Peng Z#. 2022 A chromosome-level genome of the helmet catfish (Cranoglanis bouderius).Frontiters in Genetics. 13, 962406.
9.Ni L., Xu Y., Zhao Q.,Shao F., Peng Z#. 2022 Genome-wide characterization of the Toll-like receptor gene family inTriplophysa rosaand expression profiles in response toAeromonas hydrophilainfection.Aquaculture, 555, 738208.
10.Shao F., Pan H., Li P., Ni L., Xu Y.,Peng Z#. 2021Chromosome-Level Genome Assembly of the Asian Red-Tail Catfish (Hemibagrus wyckioides).Frontiers in Genetics, 12, 747684.
11.Mao Y.,Shao F., Zhao, Q.,Peng Z#.2021 Molecular evolution of clock genes in vertebrates.Journal of Molecular Evolution, 89, 19.
12.Wang K.*, Wang J.*, Zhu C.*, Yang L.*, Ren Y.*, Ruan J.*, Fan G.*, Hu J.*, Xu W., Bi X., Zhu Y., Song Y., Chen H., Ma T., Zhao R., Jiang H., Zhang B., Feng C., Yuan Y., Gan X., Li Y., Zeng H., Liu Q., Zhang Y.,Shao F., Hao S., Zhang H., Xu X., Liu X., Wang D., Zhu M., Zhang G.#, Zhao W.#, Qiu Q.#, He S.#, Wang W#. 2021. African lungfish genome sheds light on the vertebrate water-to-land transition.Cell, 184, 1362-1376.e18.
13.Zhao Q., Zhang R., Xiao Y., Niu Y.,Shao F., Li Y., Peng, Z#. 2020. Comparative Transcriptome Profiling of the LoachesTriplophysa bleekeriandTriplophysa rosaReveals Potential Mechanisms of Eye Degeneration.Frontiers in Genetics, 10, 1334.
14.Zheng S.*,Shao F.*, Tao W.*, Liu Z.*, Long J., Wang X., Zhang S., Zhao Q., Carleton K.L., Kocher T.D., Jin L., Wang Z.,Peng Z.#, Wang D.#, Zhang Y#. 2021. Chromosome-level assembly of Southern catfish (Silurus meridionalis) provides insights into visual adaptation to the nocturnal and benthic lifestyles.Molecular Ecology Resources,21(5), 1575-1592.
15.Shao F., Ludwig A., Mao Y., Liu N.,Peng Z#. 2020. Chromosome-level genome assembly of the female western mosquitofish (Gambusia affinis).GigaScience, 9(8):giaa092.
16.Pang X.,Shao F., Ding S., Fu S., Zhang, Y#. 2020. Interspecific differences and ecological correlations of energy metabolism traits in freshwater fishes.Functional Ecology, 34(3), 616-630.
17.Zhao L.,Shao F., Hu J., Zhang Y.,Peng Z#. 2020. Identification and evolutionary analysis ofTc1/Marinertransposons in four catfish genomes.Journal of Fisheries of China (水产学报), 44(4): 539-550. (In Chinese with English abstract)
18.Hu J.,Shao F., Zhao L., Han M.,Peng Z#. 2020. Identification of MITE transposons in 33 fish genomes.Acta Hydrobiologica Sinica (水生生物学报), 44(1): 1-9. (In Chinese with English abstract)
19.Shao F., Han M.,Peng Z#. 2019. Evolution and diversity of transposable elements in fish genomes.Scientific Reports, 9: 15399.
20.Shao F., Wang J., Xu H.,Peng Z#. 2018. FishTEDB: a collective database of transposable elements identified in the complete genomes of fish.Database, 2018: bax106.
21.Xie M., Ming Y,Shao F, Jian J, Zhang Y., Peng Z#. 2018 Restriction site-associated DNA sequencing for SNP discovery and high-density genetic map construction in southern catfish (Silurus meridionalis).Royal Society Open Science, 5, 172054.
22.Xie M.,Shao F., Zhang Y.,Peng Z#.2015. Development and characterization of 21 novel microsatellite markers for the Amur catfish (Silurus asotusLinnaeus, 1758).Journal of Applied Ichthyology, 31: 917-918.
联系方式
E-mail:shaofeng(at)swu(dot)edu(dot)cn
通讯地址：重庆市北碚区天生路2号 西南大学生命科学学院400715
